This course aims at giving an overview of biomedical imaging including fluorescence, electron, X-ray and synchrotron imaging as well image analysis. The course includes showcases at the instruments and, thus, will be an important asset for students that want to integrate biological and soft-matter imaging in their Master and PhD projects. Theory as presented in lectures will be supported by discussions of relevant journal articles. Imaging Centres involved are CFIM, CAB, and DTU’s DanFix in Denmark and MAXIV and ESS…

Copenhagen, 14-21st June 2024 We will initially use Fiji to illustrate fundamental image analysis concepts, then expand to introduce other software packages such as QuPath and Napari. The students will learn what a digital image is, how and when to perform basic image processing tasks and how to combine such tasks to perform advanced image processing and segmentation, automated pixel classification and 2D and 3D measurements. Furthermore, the students will learn basis Macro programming and how to automate analysis of many…

Content This five-day comprehensive course covers the entire spectrum of quantitative bioimaging, starting from the fundamental basis of high-content microscopy, instrumentation, sample preparation, molecular markers, right to the most recent and revolutionary developments in bioimaging and bioimage data analysis, including artificial intelligence in microscopy. The course is designed for researchers having previous experience with microscopy as the course includes a poster session and optional high-content imaging of own samples. The course consists of theoretical lectures, training in imaging on high-content…

New Super-Resolution, Light-Sheet, and FCS-Methods at Scilifelab The Advanced Light Microscopy Facility, ALM, at Scilifelab gives a two-week PhD-level course on four new imaging and fluorescence spectroscopy techniques: Depletion-based Super-Resolution Imaging STED-imaging, 2D and 3D, 30-50 nm resolution In Living Cells – MoNaLISA, 1-2 Hz, 100 x 100 mm field of view MINFLUX Imaging with 3 nm resolution Tracking single molecules at 10 kHz Light-Sheet Imaging Long time-lapse imaging of live model organisms with low phototoxicity Ultrafast volumetric imaging of…

The course is updated as a Science Toolbox course and newly tailored in a Basic Module (5 ECTS) and three advanced module options (2.5 ECTS each), which can be taken directly thereafter or to a later timepoint.  Two of the advanced modules are newly designed and introduce into analytic imaging modalities, namely Mass Spectrometric Imaging and IR & Raman imaging. For details, please contact the respective module organizers Nanna Bjarnholt and Lisbeth Garbrecht Thygesen, respectively (cc). The advanced modules are…